Past Seminars
|
Speaker |
Affiliation |
Title |
Date |
|
Qing Nie |
UC Irvine |
Robust and Stochastic Dynamics in Signal Transduction and Developmental Patterning |
04/30/2013 |
|
Mike Keiser |
SeaChange Pharmaceuticals, Inc. |
04/23/2013 |
|
|
Sasha Levy |
Stanford University |
04/09/2013 |
|
|
Chenghang Zong |
Harvard |
Whole Genome Amplification and Sequencing of Single Human Cells |
04/04/2013 |
|
Kirill Korolev |
MIT |
Ecology and evolution of cancer tumors and expanding populations |
03/28/2013 |
|
Lucas Carey |
Weizmann Institute |
03/13/2013 |
|
|
Daniel Dwyer |
Boston University |
Quantitative exploration of antibiotic-induced bacterial cell death physiology |
03/12/2013 |
|
Danielle Basset |
University of California Santa Barbara |
Network Architecture and Predictive Dynamics of Brain Systems |
03/07/2013 |
|
Jianhua Xing |
Virgina Polytechnic Institute and State University |
03/05/2013 |
|
|
Zachary Pincus |
Yale University |
02/26/2013 |
|
|
Vikas Nanda |
Rutgers University |
02/19/2013 |
|
|
David Mobley |
University of California, Irvine |
Calculating binding free energies from molecular simulations:Blind predictions, model binding sites, and automated planning |
02/12/2013 |
|
Joanna Slusky |
Developmental Therapeutics Philadelphia |
01/29/2013 |
|
|
Cheemeng Tan |
Carnegie Mellon University |
Creating Synthetic Biological Systems with Coupled Genetic and non-Genetic Control Elements |
01/22/2013 |
|
D. Allan Drummond |
University of Chicago |
Selection against protein aggregation at the proteome scale (only for internal users) |
12/11/2012 |
|
Jie Xiao |
Johns Hopkins University |
Gene regulation at the single-molecule level: transcription factor and DNA looping |
11/13/2012 |
|
Gabor Balazsi |
The University of Texas MD Anderson Cancer Center |
Networks, noise and evolution: Lessons from synthetic gene circuits |
11/06/2012 |
|
Lingchong You |
Duke University |
The inoculum effect and band-pass bacterial response to periodic antibiotic treatment |
10/09/2012 |
|
Dave Mathews |
University of Rochester Medical Center |
|
09/25/2012 |
|
Guanyu Wang |
George Washington University |
Around Singularity, the Connections of Diseases |
09/18/2012 |
|
Brandon Xia |
Boston University |
Biological Networks in Three Dimensions |
09/11/2012 |
|
Ron Koder |
CCNY |
Engineering Artificial Protein Function |
09/04/2012 |
|
Claus Wilke |
University of Texas at Austin |
08/28/2012 |
|
|
Julia Hockenmaier |
University of Illinois at Urbana Champaign |
Dynamic programming for ab-initio prediction of protein folding routes |
05/29/2012 |
|
Willy Wriggers |
Weill Cornell Medical College |
04/24/2012 |
|
|
Adrian Roitberg |
University of Florida, Gainesville |
Sometimes a pKa is not a pKa. Protein Simulations at Constant pH |
04/17/2012 |
|
Yuhai Tu |
IBM Watson Research Center |
Systems biology of a simple organism: On E. coli\'s memory, computation, and energy cost |
03/20/2012 |
|
Jeffrey Gore |
Massachusetts Institute of Technology |
Cooperation, cheating, and collapse in microbial populations |
01/24/2012 |
|
Régis Pomès |
University of Toronto |
12/13/2011 |
|
|
Markus Seeliger, PhD |
Stony Brook University Medical School |
11/29/2011 |
|
|
Hue Sun Chan, PhD |
University of Toronto |
Cooperativity, Local-Nonlocal Coupling, and Nonnative Interactions in Protein Folding |
11/15/2011 |
|
Gregory A. Voth, PhD |
University of Chicago |
Theory and Simulation of Biomolecular Systems: Surmounting the Challenge of Bridging the Scales |
11/8/2011 |
|
Joel L. Sussman, PhD |
Weizmann Institute of Science |
Intrinsically Disordered Proteins: Why are they More Abundant in Higher Organisms?
|
10/25/2011 |
|
Joanna Masel, PhD |
University of Arizona |
Molecular errors, cryptic genetic variation, and evolvability |
10/4/2011 |
|
Hong Qian, PhD |
University of Washington |
9/23/2011 |
|
|
Jhih-Wei Chu, PhD |
University of California, Berkeley |
Multiscale Simulation for Biomolecular Engineering: Protein Allostery and Cellulose Deconstruction" |
9/14/2011 |
|
Koby Levy, PhD |
Weizmann Institute of Science |
6/13/2011 |
|
|
Purushottam Dixit |
John Hopkins University |
5/24/2011 |
|
|
Jiang Zhu, PhD |
NIAID/NIH |
5/17/2011 |
|
|
Paul Matsudaira, PhD |
National University of Singapore |
Dynamics of nm-size droplets of water at the confined-bulk transition |
5/12/2011 |
|
Jorg Schwender, PhD |
Brookhaven National Laboratory |
5/3/2011 |
|
|
Ross Walker, PhD |
University of California, San Diego |
Supercomputer in a Desktop: Extreme Acceleration of Scientific Applications Using NVIDIA GPUs |
4/26/2011 |
|
Hao Ge, PhD |
Fudan University |
4/21/2011 |
|
|
Sebastian Bernhardsson, PhD |
Copenhagen University |
4/19/2011 |
|
|
Alexey Onufriev, PhD |
Virginia Tech |
4/12/2011 |
|
|
Themis Lazaridis, PhD |
City College of New York |
Modeling Membrane Binding and Permeabilization by Antimicrobial Peptides |
03/22/2011 |
|
Ronald M. Levy, PhD |
Rutgers University |
03/15/2011 |
|
| Yan Li |
Brookhaven National Laboratory |
03/08/2011 |
|
| Michael Schatz, PhD |
Cold Spring Harbor Laboratory |
02/15/2011 |
|
|
Marco Ceruso, PhD |
The City College of New York, CUNY |
Elnedin: a mixed coarse-grained molecular model for the simulation of protein dynamics and protein interactions |
11/30/2010 |
|
David R. Langley, PhD |
Bristol-Myers Squibb Co., R&D |
Three-dimensional models of the HIV-1 integration complex |
11/16/2010 |
|
Lee H. Woodcock, PhD |
University of South Florida |
Multiscale Modeling as an Avenue to Explore Enzyme Reactivity and Structure |
11/02/2010 |
|
Kenneth Foreman, PhD |
Astellas Pharma |
Industrial Strength Computational Chemistry |
10/19/2010 |
|
Wei Yang, PhD |
Florida State University |
High Order Generalized Ensemble Methods: A Possible Path to Quantitative Biomolecular Simulations |
10/12/2010 |
|
Bud Mishra, PhD |
New York University |
Detectability of Certain Dark-Genome-Matter Candidates: Algorithms for Assembling Genomes Correctly |
09/28/2010 |
|
Chris Sander, Ph.D. |
Memorial Sloan-Kettering Cancer Center |
Systems Biology of Cancer Cells |
09/21/2010 |
|
Bill Jorgensen, Ph.D. |
Yale University |
NYAS Chemical Biology Discussion Group Meeting |
06/08/2010 |
|
Emmanuel Mongodin, Ph.D. |
University of Maryland School of Medicine |
Pan Genome of Borrelai burgdorferi |
05/18/2010 |
|
Marta Filizola, Ph.D. |
Mount Sinai School of Medicine |
Molecular Recognition, Activation, and Functional Specificity of G-Protein Coupled Receptors as Assessed by Biased Molecular Dynamics |
05/04/2010 |
|
Distinguished Speakers |
Stony Brook University Cancer Center and Department of Molecular Genetics & Microbiology Symposium |
Cancer Stem Cells, Differentiation and Metastasis Symposium |
04/27/2010 |
|
Ken A. Dill, Ph.D. |
University of California, San Francisco |
Nonequilibrium statistical mechanics of few-particle systems, such as in biology and nanotechnology |
04/13/2010 |
|
Roberto Sanchez, Ph.D. |
Mount Sinai School of Medicine |
Identifying protein-ligand binding sites: combining physics and evolution |
04/06/2010 |
|
Tomas Lindahl, Ph.D. |
London Research Institute |
2010 ZICKLER LECTURE |
03/30/2010 |
|
Daniel Bogenhagen, MD |
Pharmacological Sciences, Stony Brook University |
Mitochondrial Molecular Systems Biology: From the Origins of Life to Human Disease |
03/16/2010 |
|
James Glimm, Ph.D. |
Applied Mathematics and Statistics, Stony Brook University |
Parallel Computing: A Tutorial--Everything you wanted to know but were afraid to ask. |
03/15/2010 |
|
Danny Bluestein, Ph.D. |
Bioengineering, Stony Brook University |
Numerical modeling approaches for optimizing cardiovascular devices and enhancing cardiovascular disease diagnostics |
03/09/2010 |
|
Yingkai Zhang, Ph.D. |
Chemistry, New York University |
03/02/2010 |
|
|
Wei Zhu, Ph.D. |
Applied Mathematics and Statistics, Stony Brook University |
New Development in Pathway zhang |
02/23/2010 |
|
John R. True, Ph.D. |
Ecology and Evolution, Stony Brook University |
The genome as an environment: the role of epistatic genes and networks in adaptation and speciation. |
02/09/2010 |
|
David Case, Ph.D. |
Chemistry & Chemical Biology, Rutgers University |
Critical tests of the quality of protein molecular dynamics simulations in solution and crystals |
12/15/2009 |
|
Bernard Brooks, Ph.D. |
Laboratory of Computational Biology, National Institutes of Health/National Heart, Lung, and Blood Institute |
Examining Protein Structure and Function using Multi-scale Methods |
12/08/2009 |
|
Steven Skiena, Ph.D. |
Computer Science, Stony Brook University |
Genome Sequence Assembly and Synthetic Design: Better Reading and Writing through Algorithmetic |
12/01/2009 |
|
Ellen Li, M.D., Ph.D |
Department of Medicine, Division of Gastroenterology and Hepatology; Stony Brook University |
A novel pathway discovery and analysis paradigm for inflammatory bowel diseases |
11/24/2009 |
|
Charles M. Fortmann |
Materials Science & Engineering; Stony Brook University |
The biomechanics of protein folding and applications |
11/17/2009 |
|
Ken A. Dill, PhD |
University of California at San Francisco |
Exploring the physical principles of protein folding |
11/03/2009 |
|
Alex MacKerell, Ph.D. |
University of Maryland School of Pharmacy |
Optimizing ligand-protein interactions via SILCS: Site Identification by Ligand Competitive Saturation |
10/27/2009 |
|
Eugene V. Koonin, PhD |
National Institutes of Health (NIH) |
Systems biology and universals of genome evolution |
10/13/2009 |
|
DISTINGUISHED SPEAKERS |
. |
ICB&DD Symposium “Frontiers in Chemical Biology and Drug Discovery” |
10/06/2009 |
|
Robert Jernigan, PhD |
Iowa State University |
09/29/2009 |
|
|
DISTINGUISHED SPEAKERS |
. |
Laufer Center Inaugural Symposium |
09/25/2009 |
|
Randy Jirtle, Ph.D. |
Department of Radiation Oncology, Duke University, Durham, NC |
Epigenetics: The New Genetics of Disease Susceptibility |
05/19/2009 |
|
John Moult, Ph.D |
Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute |
SNPs, Protein Structure, and Disease |
05/12/2009 |
|
William Studier, Ph.D. |
Brookhaven National Laboratory, Upton, NY |
Learning from genome sequences of E. coli B and K |
05/05/2009 |
|
Andrea Califano, Ph.D. |
Center for Computational Biology and Bioinformatics, Columbia University Medical Center, New York, NY |
Molecular Network analysis reveals master regulators of physiologic and pathologic human phenotypes |
04/28/2009 |
|
Nicholas Patterson, Ph.D. |
The Broad Institute, Cambridge, MA |
Learning the Genetic History of South Asia from Genome-wide Data |
04/14/2009 |
|
Michael Hadjiargyrou, Ph.D. |
Stony Brook University, Stony Brook, NY |
Unraveling the Molecular Basis of Bone Regeneration |
03/17/2009 |
|
Dax Fu, Ph.D. |
Brookhaven National Laboratory, Upton, NY |
Novel metallochemistry in zinc transporters: integration of structural, functional and computational analyses |
03/10/2009 |
|
Steffen Mueller, PhD |
Stony Brook University, Stony Brook, NY |
Synthetic DNA technologies - perils and promise for the future of bioscience |
02/24/2009 |
|
Mickey Atwal, Ph.D. |
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY |
Natural Selection of Genetic Fidelity |
02/10/2009 |
|
Jin Wang, Ph.D. |
Stony Brook University, Stony Brook, NY |
Potential landscape and flux framework of nonequilibrium networks: robustness, dissipation, and coherence of biochemical oscillations |
02/03/2009 |
|
Michael Zhang, Ph.D. |
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY |
Computational Dissection of Mammalian Regulation Subnetworks |
12/16/2008 |
|
Weigang Qiu, Ph.D. |
Department of Biological Sciences, Hunter College, New York, NY |
Lineage-specific genomic variations in Lyme disease bacteria and implications for pathogenesis |
12/09/2008 |
|
David S. Eisenberg, Ph.D. |
University of California, Los Angeles, CA |
Structural Insights into Amyloid and Prion Diseases |
11/25/2008 |
|
David Baker, Ph.D. |
Department of Biochemistry, University of Washington, Seattle, WA |
2008 ADRIEN ALBERT LECTURE - From prediction of structure to design of function |
11/21/2008 |
|
Arnold J. Levine, Ph.D. |
The Simons Center for Systems Biology, Institute for Advanced Study, Princeton, NJ |
2008 ZICKLER LECTURE - The p53 Pathway: Cancer, Fertility, Metabolic Control and the Central Nervous System |
11/11/2008 |
|
Bruce Futcher, Ph.D. |
Stony Brook University, Stony Brook, NY |
Transcription Circuits, in Shades of Green and Red |
11/04/2008 |
|
Robert C. Rizzo, Ph.D. |
Stony Brook University, Stony Brook, NY |
Characterization of drug resistance at the atomic level |
10/28/2008 |
|
Eli Hatchwell, MA MB BChir (Cantab) DPhil (Oxon) |
Stony Brook University, Stony Brook, NY |
The Future of Personalized Medicine |
10/21/2008 |
|
Stanley Fields, Ph.D. |
University of Washington, Seattle, WA |
Footprinting the Genome |
10/17/2008 |
|
Uri Alon, Ph.D. |
Weizmann Institute of Science, Rehovot, Israel |
Design Principles of Biological Circuits |
10/07/2008 |
|
John Reinitz, Ph.D. |
Stony Brook University, Stony Brook, NY |
Canalization of transcription in the Drosophila blastoderm: from data to dynamical systems |
09/23/2008 |
|
Sergei Maslov, Ph.D. |
Brookhaven National Laboratory, Upton, NY |
Modeling biomolecular networks: from metabolism and its regulation to protein-protein interactions |
09/16/2008 |
|
David F. Green, PhD |
Stony Brook University, Stony Brook, NY |
Applied protein design: Engineering molecular interactions in complex systems |
09/09/2008 |